Fungal genomics [electronic resource] : methods and protocols / edited by Jin-Rong Xu, Burton H. Bluhm.

Bibliographic Details
Uniform Title:Methods in molecular biology (Clifton, N.J.) ; v. 722. 1064-3745
Springer protocols.
Other Authors: Xu, Jin-Rong
Bluhm, Burton H.
Language:English
Published: New York : Humana Press, c2011.
Series:Methods in molecular biology (Clifton, N.J.) ; v. 722.
Springer protocols.
Subjects:
Fungi > Genetics > Laboratory manuals.
Genomics > Technique.
Genre:
Laboratory manuals.
Online Access:
Springer Nature Complete Protocols: 2011 (Springer Link)
Variant Title:
Fungal Genomics: Methods and Protocols
Format: Electronic eBook
Contents:
  • Genome sequencing and assembly / Manfred G. Grabherr, Evan Mauceli, and Li-Jun Ma
  • Targeted cloning of fungal telomeres / Mark L. Farman
  • Identification and annotation of repetitive sequences in fungal genomes / Braham Dhillon and Stephen B. Goodwin
  • Next-generation sequencing and potential applications in fungal genomics / Phillip SanMiguel
  • Getting the most out of your fungal microarray data : two cost- and time-effective methods / Sandra M. Mathioni ... [et al.]
  • Fusarium graminearum from expression analysis to functional assays / Heather E. Hallen-Adams, Brad L. Cavinder, and Frances Trail
  • EST analysis pipeline : use of distributed computing resources / Francisco Javier González and Juan Antonio Vizcaíno
  • Application of ChIP-chip analysis in the rice blast pathogen / Soonok Kim and Thomas K. Mitchell
  • Proteome studies of filamentous fungi / Scott E. Baker and Ellen A. Panisko
  • Bioinformatics pipeline for sequence-based analyses of fungal biodiversity / D. Lee Taylor and Shawn Houston
  • Identifying protein complexes by affinity purification and mass spectrometry analysis in the rice blast fungus / Wende Liu ... [et al.]
  • Large scale identification of genes involved in plant-fungal interactions using Illumina's sequencing-by-synthesis technology / R.C. Venu ... [et al.]
  • High-throughput production of gene replacement mutants in Neurospora crassa / Gyungsoon Park ... [et al.]
  • Phenotypic analysis of Neurospora crassa gene deletion strains / Gloria E. Turner
  • Efficient approaches for generating GFP fusion and epitope-tagging constructs in filamentous fungi / Xiaoying Zhou, Guotian Li, and Jin-Rong Xu
  • Large-scale insertional mutagenesis in Magnaporthe oryzae by Agrobacterium tumefaciens-mediated transformation / Xiao-Lin Chen, Jun Yang, and You-Liang Peng
  • Molecular methods for studying the Cryphonectria parasitica
  • hypovirus experimental system / Angus L. Dawe ... [et al.]
  • Metabolic fingerprinting in Fusarium verticillioides to determine gene function / Jonathon E. Smith and Burton H. Bluhm
  • Tapping genomics to unravel ectomycorrhizal symbiosis / Jonathan M. Plett ... [et al.].